SASB 2019

10th International Workshop on Static Analysis for Systems Biology

October 8
Porto, Portugal

Objective

SASB is a one-day workshop aimed at promoting discussions and collaborations at the intersection between programming languages, formal methods, static analysis, and systems and synthetic biology of natural and engineered systems. It is important to note that, despite the name of the workshop, we are not limiting the program to work in static analysis, but rather are open to submissions in all of the topics we have listed.

Previous workshops have been held in:

SASB 2019 will be co-located with SAS 2019, both being part of the FM'19 world congress.

Scope

The program of SASB 2019 will consist of invited talks, presentations of refereed talks, and presentations of refereed papers. Contributions are welcome on all aspects of modeling languages and associated analysis techniques, including static analysis of natural biological systems and the design, specification and verification of engineered biological and chemical systems. This includes, but is not limited to:

  • static analysis frameworks and tools
  • equivalences and equivalence checking techniques
  • model reduction and decomposition techniques based on static analysis
  • state space compaction based on static analysis
  • links between topology and dynamics
  • constraint-based and stoichiometric analysis
  • languages for compact description of biological models
  • formalisms for description of biological networks
  • programming languages for molecular devices
  • static analysis in verification of molecular devices design
  • standards for models and their annotation
  • case studies and method applications
  • informal methods (that could be candidate to formalization)

This workshop welcomes work in progress, overviews of more extensive work, programmatic or position papers and tool presentations.

Proceedings and post-proceedings

The workshop will have informal proceedings, posted on its web page.

Revised versions of selected papers will be published after the workshop by Springer in a volume of its Lecture Notes in Computer Science (LNCS), which will collect contributions to some workshops and symposia co-located with FM 2019. Condition for inclusion in the post-proceedings is that at least one of the co-authors has presented the paper at the Workshop.

Submission instructions

Please submit your regular paper (up to 15 pages), short paper (up to 6 pages), or extended abstract (2 pages), in LNCS style, via the SASB 2019 author interface of EasyChair.

All submissions will be peer-reviewed by at least three members of the program committee for quality and relevance.

Important Dates

  • Submission deadline: June 30
  • Notification of acceptance: July 31
  • Final version due: 02 September
  • Workshop: 8 October
  • Post-proceedings due: 15 November (tentative)

Venue and Registration

Please see the main main FM'19 page for details.

Organizers

Program chairs

Program Committee

  • Lea Popovic - Concordia University, Canada
  • Verena Wolf - Saarland University, Germany
  • David Šafranek - Masaryk University, Czech Republic
  • Tatjana Petrov - University of Konstanz
  • Jerome Feret - INRIA, France
  • Luca Cardelli - Microsoft, UK
  • Ashutosh Gupta - TIFR, India
  • John Bachman - Harvard University, USA
  • Loic Pauleve - CNRS/LRI, France
  • Heinz Koeppl - TU Darmstadt, Germany
  • Nicola Paoletti - Stony Brook University, USA
  • Hans-Michael Kaltenbach - ETH Zurich, Switzerland
  • Natasa Miskov-Zivanov - University of Pittsburgh, USA
  • Eugenio Cinquemani - INRIA, France
  • Thomas Sauter - University of Luxembourg

Contact
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