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--------          Output from RPoly v1.2            --------
--------   Haplotype Inference by Pure Parsimony    --------
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BEGIN COMMAND_LINE
./rpoly input
END COMMAND_LINE

BEGIN DESCRIBE_TASK
minimizing number of distinct haplotypes
END DESCRIBE_TASK

BEGIN INPUT_SUMMARY
Number of Individuals: 5
Number of Loci: 7
Number of Ambiguous Positions: 17
END INPUT_SUMMARY

List of haplotypes on the solution and respective frequency
BEGIN LIST_HAPLOTYPES
Id   Haplotype      Frequency
1  0000000	1
2  0000110	1
3  0110001	2
4  1001110	2
5  1011101	3
6  1110100	1
END LIST_HAPLOTYPES

Minimum number of haplotypes required: 6

Reconstruction of the genotypes (genotype = haplotype1 + haplotype2)
BEGIN PAIRS
Genotype        Resolution
1011101 = 1011101 + 1011101
2002110 = 0000110 + 1001110
2022202 = 0000000 + 1011101
2110202 = 0110001 + 1110100
2222222 = 0110001 + 1001110
END PAIRS
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